CHILDHOOD CANCER REPOSITORY

Powered by

Alex's Lemonade Stand Foundation

Neuroblastoma PDCLs OPEN

 
NeuroblastomaOxygen Condition
 2%5%20%5%
 Suffix
Request Cell Line Phase of Therapy Sample Type PDX MYCN ALK GD2 TH TMM p53 h2 h none hnb
 CHLA-100Dxtumor A        
 CHLA-101Dxbone marrow A   TERT    
 CHLA-105Dxbone marrow A        
 CHLA-117BDxbone marrow         173 
 CHLA-122Dxbone marrow AWT++TERTF102 72 
 CHLA-123Dx blood A        
 CHLA-126Dxbone marrow         116 
 CHLA-129Dxtumor         165 
 CHLA-137Dxtumor        98144 
 CHLA-138Dxbone marrow        107144 
 CHLA-139Dxbone marrow        7199 
 CHLA-14Dx  A  +TERT  117144 
 CHLA-142Dxbone marrow           
 CHLA-143Dxbone marrow          
 CHLA-144Dxbone marrow AWT+-TERT  60133 
 CHLA-15Dxtumor NR1275Q++TERTF50 21 
 CHLA-151Dxtumor A R1275Q +TMM-  124 
 CHLA-152Dxtumor        107108 
 CHLA-153Dxbone marrow           
 CHLA-16Dxpleural fluid NR1275Q +TERT  8089 
 CHLA-160Dxtumor A      9290 
 CHLA-27Dxbone marrow AF1174L       
 CHLA-29Dxbone marrow AWT +TERT    
 CHLA-30Dxtumor A  +TERT     
 CHLA-42Dxbone marrow NR1275Q +TERTF   
 CHLA-43Dxbone marrow AWT       
 CHLA-44Dxbone marrow N  +TERT    
 CHLA-54Dx  A        
 CHLA-78Dxbone marrow A     54 277 
 CHLA-83Dxbone marrow A     39 198 
 COG-N-261Dxtumor AWT +TERT   124 
 COG-N-263Dxtumor NWT +TERT   119 
 COG-N-265Dxtumor AWT +TERT   178 
 COG-N-276Dxbone marrow AWT +TERT   61 
 COG-N-278Dxtumor AWT +TERT   88 
 COG-N-293Dxtumor AWT +TERT   88 
 COG-N-294Dxtumor AR1275Q +TERTNF  350 
 COG-N-295Dxtumor NF1174L +TERT   58 
 COG-N-296Dxbone marrow A  +TMM-   347 
 COG-N-297Dxtumor AWT +TERT   28 
 COG-N-299Dxtumor AWT +TERT   347 
 COG-N-303Dxtumor AWT -TMM-   84 
 COG-N-305Dxtumor AWT +TERT   187 
 COG-N-311Dxbone marrow          
 COG-N-312Dxbone marrow A  +TERT   35 
 COG-N-316Dxbone marrow A  +TERT   94 
 COG-N-320Dx tumor     TMM-   89 
 COG-N-322Dx tumor AWT +TERT   106 
 COG-N-323Dxtumor NWT      25 
 COG-N-324Dxbone marrow AWT +TERT   257 
 COG-N-328hDxtumor AWT +TERT  116  
 COG-N-331Dxbone marrow AWT +TERT   55 
 COG-N-333Dxbone marrow AF1174L +TERT   73 
 COG-N-347Dxbone marrow AWT +TERT  126 
 COG-N-349Dxbone marrow AWT +TERT  192 
 COG-N-353Dxbone marrow AWT +TERT  144 
 COG-N-354Dxbone marrow A  +TERT  112  
 COG-N-367Dxbone marrow AR1275Q +TERT  49
 COG-N-373Dxbone marrow AWT +TERT 182 126 
 COG-N-386hDxbone marrow     TERT    
 COG-N-442hDxbone marrow NWT +Unknown 57 98 
 COG-N-445Dxbone marrow AWT +TERT 90217
 COG-N-462hDxbone marrow AWT +TERT 120144  
 COG-N-474Dxbone marrow AF1174L +TERT 187 
 COG-N-480h2Dxbone marrowAWT +EST 277  158
 COG-N-490hDxbone marrow AWT +TERT  61  
 COG-N-491hDxblood AWT +TERT 198 
 COG-N-496Dxbone marrowAWT++TERT 16513985
 COG-N-497Dxbone marrow A  +TERT 76
 COG-N-500Dxbone marrow N  +TERT   112
 COG-N-504Dxbone marrow N       315
 COG-N-509hnbDxbone marrow N  +EST    350
 COG-N-518hDxbone marrowN  +ESTN 267  
 COG-N-531hDxbone marrow A       
 COG-N-532Dxbone marrow N   Unknown 55239
 COG-N-539Dxtumor A      
 COG-N-540Dxbone marrow N   TERT 144267 
 COG-N-542hDxbone marrow A        
 COG-N-544Dxbone marrow N   Unknown 102
 COG-N-546hDxbone marrowA     161165 
 COG-N-548Dxbone marrow N     161 
 COG-N-554Dxbone marrow A      
 COG-N-556Dxbone marrow A      
 COG-N-557Dxbone marrowAF1245L+ TERT 124136114
 COG-N-562 Dxtumor N  +EST  
 COG-N-563Dxbone marrow A     
 COG-N-571Dxbone marrow N       
 COG-N-572hDxbone marrow N        
 COG-N-573Dxbone marrowAWT +TERT 25792239
 COG-N-574Dxbone marrow A     
 COG-N-575Dxbone marrow A     
 COG-N-581hDxbone marrow A       
 COG-N-582hDxbone marrow A       
 COG-N-585Dxbone marrow A     
 COG-N-586Dxbone marrow A     
 COG-N-590DxtumorAWT++TERT  187277
 COG-N-600Dxbone marrow A     
 COG-N-603DxtumorAWT+ TERT 1175874
 COG-N-626hDxbone marrow        
 COG-N-628Dxbone marrowAWT+   144103131 
 COG-N-636DxtumorAWT+   12890154
 COG-N-651hDxbone marrowN   TERT 89315 
 COG-N-675 Dxbone marrow N     9884158
 COG-N-682Dxbone marrowA   TERT 86596995
 COG-N-683Dxbone marrowA +   835377105
 COG-N-700DxtumorN negTERT 161169144
 COG-N-708DxtumorN +   N210257
 COG-N-709DxtumorN     114
 COG-N-732DxtumorA   Unknown 17892169 
 COG-N-733Dxtumor A   Unknown 96117 
 COG-N-734Dxbone marrow A   TERT  9112484
 COG-N-740Dxtumor    Unknown 14773
 COG-N-742Dxtumor     Unknown  107 
 COG-N-743hDxtumor    TERT 21777  
 COG-N-750Dxbone marrow   + ALT   120 
 COG-N-791Dxtumor    TERT  116 
 COG-N-845Dxbone marrow    TERT  
 LA-N-2Dxtumor     TERT    
 LA-N-5Dxbone marrow AR1275Q++TERT   100 
 NB-1643 dbGaP info iconDxtumor AR1275Q +TERT    
 SK-N-BE(1)Dxbone marrow AWT +TERTF51 96 
 SMS-KANDxtumor AWT++TERTF62 95 
 SMS-KCNDxtumor AR1275Q++TERTF117 109 
 SMS-MSNDxbone marrow          
 SMS-SANDxbone marrow AF1174L +TERTF  71 
 CHLA-102PDtumor A   ALT  7566 
 CHLA-103PDtumor A      112200+ 
 CHLA-108PDbone marrow A   Unknown 75 63 
 CHLA-109PDbone marrow     TERT    
 CHLA-110PDbone marrow A      6053 
 CHLA-116PDbone marrow        92139 
 CHLA-118PDbone marrow         141 
 CHLA-119PDbone marrow AWT++TERTNF  88 
 CHLA-120PDtumor        200+  
 CHLA-125PDbone marrow A        
 CHLA-127PDtumor          
 CHLA-132PDbone marrow N  +TMM-    
 CHLA-140PDbone marrow NWT +     
 CHLA-145PDbone marrow AWT -TERT 60 128 
 CHLA-146PDbone marrow N       187 
 CHLA-150PDbone marrow NR1275Q     100112 
 CHLA-161PDbone marrow A        
 CHLA-164PDbone marrow          
 CHLA-183PDbone marrow N       36 
 CHLA-20PDtumor NR1275Q++TERTF45 28 
 CHLA-21PDbone marrow A        
 CHLA-22PDbone marrow N        
 CHLA-247PDbone marrow AWT +TERT    
 CHLA-253PDtumor AWT  TERT    
 CHLA-255PDtumor          
 CHLA-28PDbone marrow AF1245C       
 CHLA-34PDbone marrow N        
 CHLA-41PDtumor AWT       
 CHLA-46PDtumor AWT       
 CHLA-58PDtumor          
 CHLA-70PDbone marrow N + ALT    
 CHLA-95PDtumor AR1275Q  TERT   248 
 COG-N-269PDtumor NWT -TERT   91 
 COG-N-289PDtumor A WT +TERT   38 
 COG-N-291PDbone marrow NWT +TMM-   224 
 COG-N-318PDtumor AWT +TERT   129 
 COG-N-321PDbone marrow A  +TERTNF65% 128 
 COG-N-325PDtumor AWT +    55 
 COG-N-327PDbone marrow AWT +TERT  204 
 COG-N-334PDbone marrow AWT +TERT  48 
 COG-N-346PDtumor NWT +TERT    
 COG-N-372hPDbone marrow NWT +TERT  96 
 COG-N-381hPDfluid     TERT  36  
 COG-N-387hPDbone marrow AWT +  248267  
 COG-N-396hPDtumor     TERT  96  
 COG-N-443hPDbone marrow NF1245C +Unknown 10751 
 COG-N-469hPDbone marrow NF1174L +TERT  70  
 COG-N-473hPDbone marrow AWT +TERT  100
 COG-N-475hPDtumor AR1275Q  TERT  96126 
 COG-N-478PDbone marrow NWT +TERT  224
 COG-N-482hPDbone marrow A  +TERT    
 COG-N-507hPDbone marrow A   TERT  102  
 COG-N-508hPDbone marrow A   TERT    
 COG-N-511h2PDbone marrow N  +TERT   
 COG-N-512 PDbone marrow A     193 
 COG-N-513PDbone marrow A     103
 COG-N-514PDbone marrow A      
 COG-N-515PDbone marrow A +    
 COG-N-549PDtumorNF1174L +  6067126
 COG-N-553PDbone marrow A + TERT 1207751
 COG-N-579hPDbone marrowN  +   120 
 COG-N-618PDbone marrowNWT+   13157102 
 COG-N-619PDbone marrowNWT    819495 
 COG-N-623PDtumorAWT+   8388126
 COG-N-707PDbone marrowA +    7591 
 COG-N-711hPDblood N +    103  
 COG-N-731PDbone marrowA +      
 COG-N-752PD bone marrow       350210165 
 COG-N-793hPDbone marrow   +    165  
 COG-N-818PDtumor    TERT   
 LA-N-1PDbone marrow AF1174L+ TERT    
 LA-N-6PDbone marrow ND1091N +ESTF  150 
 NB-Ebc1 dbGaP info iconPDtumor NWT +     
 SK-N-BE(2)PDbone marrow AWT++TERTNF37 27 
 SK-N-FIPDbone marrow NWT +ALT    
 SMS-KANRPDbone marrow AWT +TERTF55 69 
 SMS-KCNRPDbone marrow AF1174L++TERTF45 72 
 SMS-LHNPDtumor N  +TERTF  216 
 CHLA-111bPD-BMTbone marrow          
 CHLA-134PD-BMTbone marrow AWT + NF   
 CHLA-136PD-BMTblood AWT++TERTF907844 
 CHLA-172PD-BMTbone marrow NWT + NF  110 
 CHLA-188LPD-BMTbone marrow AWT       
 CHLA-188RPD-BMTbone marrow AWT       
 CHLA-190PD-BMTtumor          
 CHLA-51PD-BMTbone marrow NWT + F   
 CHLA-79 dbGaP info iconPD-BMTtumor NWT +TERTF   
 CHLA-8PD-BMTtumor AWT + F   
 CHLA-90PD-BMTbone marrow NF1245Vneg-ALTNF  59 
 COG-N-476PD-BMTtumor AWT +TERT  50
 CHLA-11PD-BMT, PMblood AWT++TERTN 7453 
 CHLA-12PD-BMT, PMbone marrow AWT +TERTN 5065 
 CHLA-171PD-PMperipheral blood NWT++TERTNF  89 
 CHLA-225PD-PMfluid AWT +TERTN  62 
 CHLA-52PD-PMbone marrow AF1174L +TERTN  86 
 CHLA-53PD-PMblood AF1174L +TERTN  92 
 CHLA-60PD-PMbone marrow NWT +TERTF  96 
 CHLA-61PD-PMblood NR1275Q +TERTF  102 
 COG-N-399PD-PMblood AWT +TERTF 40
 COG-N-415PD-PMbloodA F1174L +TERT  6450
 COG-N-421PD-PMbloodAWT++TERTN 6565 
 COG-N-440PD-PMbloodAWT++TERTF14713665
 COG-N-452PD-PMbloodAF1174L +TERTF20412274
 COG-N-453PD-PMtumorAWT +TERTF21012071
 COG-N-470PD-PMbloodNF1174L +TERTF13910382 
 COG-N-471PD-PMbloodAWT +TERTN   128
 COG-N-505PD-PMblood AWT++TERTF79 
 COG-N-519PD-PMbloodAWTneg+TERTN635538
 COG-N-529PD-PMblood NWT +TERTF986981
 COG-N-534PD-PMblood NF1245C++TERTN 144 
 COG-N-536hPD-PMblood AR1275Q +TERTN128  
 COG-N-561PD-PMbloodAF1245I +TERTF99124103
 COG-N-564hPD-PMbloodA ++TERT 11698  
 COG-N-577PD-PMblood N  +TERT 
 COG-N-615PD-PMbloodN  +TERT 117  
 COG-N-645PD-PMblood A   TERT 
 COG-N-660hnbPD-PMbloodN   TERT  158 
 COG-N-672PD-PMbloodA + TERT  80 
 COG-N-685PD-PMbloodA   Unknown 126165 124
 COG-N-748PD-PMbloodA   TERT  139
 COG-N-813PD-PMbloodN       
 COG-N-815PD-PMbloodA   TERT 
 COG-N-853PD-PMpost mortem blood    TERT   
 COG-N-863hPD-PMblood    TERT     
 Felix dbGaP info iconPD-PMbloodNF1245V +TERTF 62277 
 FU-NB-2006PD-PMblood NWT +TERT  7248 
 CB-JHAN            
 CB-JMN            
 CHLA-104 bone marrow        161161 
 CHLA-106 bone marrow     TERT    
 CHLA-124 tumor        124200 
 CHLA-13   N  +TERT  12296 
 CHLA-157 bone marrow     TERT    
 CHLA-158 bone marrow     Unknown    
 CHLA-159 tumor     Unknown    
 CHLA-162 tumor        116 
 CHLA-163 tumor        165231 
 CHLA-165 tumor        99136 
 CHLA-168 bone marrow        126100 
 CHLA-169 tumor        277 
 CHLA-17   AWT       
 CHLA-174 tumor N        
 CHLA-175 tumor N        
 CHLA-179 bone marrow A        
 CHLA-18 bone marrow NWT +TERT  13399 
 CHLA-182 bone marrow     TERT    
 CHLA-185 tumor     Unknown    
 CHLA-19 bone marrow NWT     200+200+ 
 CHLA-234 tumor NWT       
 CHLA-248 tumor          
 LA-N-7       TERT    

1 - Phase of therapy for the patient at the time the specimen used to derive the cell line was obtained
Dx (Diagnosis): cell lines derived from samples of patients prior to treatment
PD (Progressive Disease): cell lines derived from samples of patients who relapsed after chemotherapy
PD-BMT: cell lines derived from samples of patients who relapsed after chemotherapy and bone marrow transplantation
PD-PM: cell lines derived from samples of post-mortem patients who relapsed after chemotherapy

2 -MYCN oncogene amplification
N: MYCN Non-Amplified
A: MYCN Amplified

3 - TP53 gene function
F: Functional
N: Non-Functional

4 - EWS/FLI1 Status
FLI1: friend leukemia insertion - chromosome 11, t(11;22)
ERG: ets-related gene - chromosome 21, t(21;22)

ALK mutation

WT: Wild Type

TMM:Telomere Maintenance mechanism

✓ = Available/available upon request

SQ- subcutaneous injection

TV- intravenous (tail vein)

EST- ever shorter telomeres, i.e. telomerase and ALT negative

TERT+- telomerase positive

ALT - alternate lengthening of telomeres, C-circle positive